Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803881.1_cds_XP_016486585.1_7700
CDS Infomation

[gene=LOC107806833] [db_xref=GeneID:107806833] [protein=probable galacturonosyltransferase 15 isoform X2] [protein_id=XP_016486585.1] [location=complement(join(16700..16987,17344..17646,17747..18328,20077..20214,20253..20270))] [gbkey=CDS]
Sequence

ATGCTGGCATTGCTGGAGGCAACAAGTGATGGTGAGGATGGAAAAGGAGGGATAGAGAGT
TCAACTTCATTACCATCCTCATTCAATGATCTTGTGAAGGACATGACCTCTAGTGGACAA
GACATCAAAGCTTTCGCTTTCAAAACTAAAGCTATGATAGTGAAGATGGAGCAATTGGTA
GAATCAGCTAGACAACGTGAGTCTATTTTCTGGCATTTAGCTTCTCACGGTGTACCAAAG
GGCATACATTGCCTATCTCTCAAGTTAGCTGAAGAATATGCTGAAAATGCTGCTGCACGT
TCTCGCTTGCCTCCCCCTCAATATGTTTCACGCCTCACTGACCCTTCCTTCCATCACGTA
GTTCTTTTAACAGACAATGTACTTGTTGCGTCTGTTGTAGTTTCCTCAACCATCAAAAGC
TCAAGTATCCCAGAAAGATTGGTATTTCATATAGTTACTGATAAGAAGACATACACCGCG
ATGCATGCATGGTTTGCCGTGAGCTCAGTTAATTCAGCTGTCCTGGAAGTAAGAGGATTG
CATCAGTATGATTGGTCTCATGAGGTGAATATCGGGATTAAGGAGATGATAGAGATCCAT
CGATTAATCTGTAGACACAAATTTGACCGCATGAAGAGGGAAACTTTGGCAAACGAGTAT
GAAAATGATAAGGATTTGCAGTATCTACGGCCTAGCTGTGCATCCCTTTTGAATCATCTG
CGCATCTATATCCCCGAGCTCTTTCCAGACCTGAACAAGATTATATTTTTGGACGATGAT
ACTGTAGTACAGCATGATTTATCATCTCTATGGGAACTGGATCTCAACGGGAAAGTTGTT
GGTGCAGCTTTTGACTCGGGCTGTGGAGATGGCTGTTGCCCCGGAAGAAAGTACAAGGAT
TACTTCAACTTTACGAGCCCTGTTATATCATCTAAGCTGGATTATGATCGTTGTGGATGG
CTTTATGGAATGAATGTCTTTGATCTTCAAGCTTGGAGAAAGACTAACATCACTGCGACT
TACCATCACTGGCTTAAACTTAGTCTCAACTCTGGTTTTGAACTGTGGAATCCTGGAGCA
CTTCCACCTTCCCTGATTGCTTTTGAGGGTCATGTGCATAGGATTGATCCTTCGTGGCAC
ATTGCTGGTTTAGGTTATCGATCTATTATGAATGTTACAGAGTCTATACTGGAAAACGTA
GCTGTTGTACATTTCAGTGGACCAGCCAAGCCATGGCTTGAGATTGGAAGCCCTGAGATA
CGAAGCTTATGGAGTCGCCATGTAAATTTCTCAAACGAATACGTTAGGAAATGTGGAATC
GTGGGGTGA

Peptide Sequence

PEP ID

XP_016486585.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 15 isoform X2 [Nicotiana tabacum]
Sequence

MLALLEATSDGEDGKGGIESSTSLPSSFNDLVKDMTSSGQDIKAFAFKTKAMIVKMEQLV
ESARQRESIFWHLASHGVPKGIHCLSLKLAEEYAENAAARSRLPPPQYVSRLTDPSFHHV
VLLTDNVLVASVVVSSTIKSSSIPERLVFHIVTDKKTYTAMHAWFAVSSVNSAVLEVRGL
HQYDWSHEVNIGIKEMIEIHRLICRHKFDRMKRETLANEYENDKDLQYLRPSCASLLNHL
RIYIPELFPDLNKIIFLDDDTVVQHDLSSLWELDLNGKVVGAAFDSGCGDGCCPGRKYKD
YFNFTSPVISSKLDYDRCGWLYGMNVFDLQAWRKTNITATYHHWLKLSLNSGFELWNPGA
LPPSLIAFEGHVHRIDPSWHIAGLGYRSIMNVTESILENVAVVHFSGPAKPWLEIGSPEI
RSLWSRHVNFSNEYVRKCGIVG

Transcript Sequence

Gene sequence data has not been registered.